Preprints
Gould E, [...], Roche DG, [...], et al. (2023) Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology. EcoEvoRxiv 10.32942/X2GG62
Hermer E, Irwin AA, Roche DG, Dakin R (2023) How prior and p-value heuristics are used when interpreting data. bioRxiv 10.1101/2023.09.03.556128
2023
74. Levet M, Roche DG , Killen SS, Colosio S, Bshary R, Miest JJ, Binning SA. Energetic costs of mounting an immune response in a coral reef damselfish (Pomacentrus amboinensis). Canadian Journal of Zoology 10.1139/cjz-2023-0033
73. Higino G, Barros C, Bledsoe E, Roche DG, Binning SA, Poisot T (2023) Post-doctoral scientists are mentors - it is time to recognize their work. PLOS Biology 10.1371/journal.pbio.3002349
72. Berberi & Roche DG (2023) Reply to: Recognizing and marshalling the pre-publication error correction potential of open data for more reproducible science. Nature Ecology & Evolution 10.1038/s41559-023-02142-5
71. Roche DG, Tytell ED, Domenici P (2023) Kinematics and behaviour in fish escape responses: guidelines for conducting, analysing and reporting experiments. Journal of Experimental Biology 226: jeb245686
70. Bertram MJ, Sundin J, Roche DG, Sánchez-Tójar A, Thoré ESJ, Brodin T (2023) Primer: Open Science. Current Biology 33: R792-R797
2022
69. Berberi I & Roche DG (2022) No evidence that mandatory open data policies increase error correction. Nature Ecology & Evolution 6: 1630-1633 (OA version: 10.31222/osf.io/k8ver)
68. Guitard JJ, Chrétien E, De Bonville J, Roche DG, Boisclair D, Binning SA (2022) Increased parasite load is associated with reduced metabolic rates and escape responsiveness in pumpkinseed sunfish host. Journal of Experimental Biology 225: jeb243160
67. Bledsoe EK, Burant JBB, Higino GT, Roche DG, Binning SA, Finlay K, Pither J, Pollock LS, Sunday JM, Srivastava DS (2022) Data rescue: saving environmental data from extinction. Proceedings of the Royal Society B 289: 20220938
67. Bledsoe EK, Burant JBB, Higino GT, Roche DG, Binning SA, Finlay K, Pither J, Pollock LS, Sunday JM, Srivastava DS (2022) Data rescue: saving environmental data from extinction. Proceedings of the Royal Society B 289: 20220938
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66. Jenkins T, Persaud B, Cowger W, Szigeti K, Roche DG, Clary E, Slowinskis, Lei B, Abeynayaka A, Nyadjro ES, Maes T, Hampton LT, Bergmann M, Aherne J, Mason SA, Honek J, Rezanezhad F, Lusher A, Booth AM, Smith RDL, Van Cappellen P (2022) Current state of microplastic pollution research data: trends in availability and sources of open data. Frontiers in Environmental Science 10: 912107
65. Cooke SJ, Michaels S, Nyboer EA, Schiller L, Littlechild DBR, Hanna D, Robichaud CD, Murdoch A, Roche DG, Soroye P, Vermaire JC, Nguyen VM, Young N, Provencher JF, Smith PA, Mitchell GW, Avery-Gomm S, Davy CM, Buxton RT, Rytwinski T, Fahrig L, Bennett JR, Auld G (2022) Reconceptualizing conservation. PLOS Sustainability and Transformation 1: e0000016
64. Roche DG, Berberi I, Dhane F, Lauzon F, Soeharjono S, Dakin R, Binning SA (2022) Slow improvements to the archiving quality of open datasets in ecology and evolution. Proceedings of the Royal Society B 289: 20212780
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63. Young N, Roche DG, Lennox RJ, Cooke SJ, Bennett JR (2022) Ethical ecosurveillance: mitigating the potential impacts on humans of widespread environmental monitoring. People and Nature doi: 4: 830-840
62. Roche DG, Raby GD, Norin T, Ern R, Scheuffele H, Skeeles M, Morgan R, Andreassen AH, Clements J, Louissaint S, Jutfelt F, Clark TD, Binning SA (2002) Paths towards greater consensus building in experimental biology. Journal of Experimental Biology 225: jeb243559
61. Parsons et al – 100+ authors (2022) A community-sourced glossary of open scholarship terms. Nature Human Behaviour 6: 312-318
2021
2021
60. Cooke SJ, Young N, Donaldson MR, Nyboer EA, Roche DG, Madliger CL, Lennox RJ, Chapman JM, Faulkes Z and Bennett JR. (2021) Ten strategies for avoiding and overcoming authorship conflicts in academic publishing. FACETS 6: 1753–1770
59. Roche DG, O’Dea RE, Kerr KA, Rytwinski T, Schuster R, Nguyen VM, Young N, Bennett JR, Cooke SJ (2021) Closing the knowledge-action gap in conservation with open science. Conservation Biology 36: e13835
58. Cooke SJ, Nguyen VM, Young N, Reid AJ, Roche DG, Bennett N, Rytwinski T, Bennett JR (2021) Contemporary authorship guidelines fail to recognize diverse contributions in conservation science research. Ecological Solutions and Evidence 2: e12060
57. O'Dea RE, Parker TH, Chee YE, Culina A, Drobniak SM, Duncan DH, Fidler F, Gould E, Ihle M, Kelly KD, Lagisz M, Roche DG, Sánchez-Tójar A, Wilkinson DP, Wintle BC, Nakagawa S (2021) Towards open, reliable, and transparent ecology and evolutionary biology. BMC Biology 19: article 68
56. Roche DG, Jornod M, Douet V, Grutter AS, Bshary R (2021) Client fish traits underlying variation in service quality in a marine cleaning mutualism. Animal Behaviour 175:137-151
55. Soeharjono S & Roche DG (2021) Reported individual costs and benefits of sharing open data among Canadian academic faculty in ecology and evolution. BioScience 7: 750-756
55. Soeharjono S & Roche DG (2021) Reported individual costs and benefits of sharing open data among Canadian academic faculty in ecology and evolution. BioScience 7: 750-756
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54. Roche DG (2021) Effects of wave-driven water flow on the fast-start escape response of juvenile coral reef damselfishes. Journal of Experimental Biology 224: jeb234351
53. Buxton RT, Bennett JR, Reid AJ, Shulman CM, Cooke SJ, Francis CM, Nyboer EA, Pritchard G, Binley A, Avery-Gomm S, Ban NC, Beazley KF, Bennett E, Blight LK, Bortolotti LE, Camfield AF, Gadallah Z, Jacob AL, Naujokaitis-Lewis I, Raudsepp-Hearne C, Roche DG, Soulard F, Stralberg D, Sadler KD, Solarik KA, Ziter CD, Brandt J, McKindsey CW, Greenwood DA, Boxall PC, Ngolah C, Chan KMA, Lapen D, Poser S, Girard J, DiBacco C, Hayne S, Orihel D, Lewis D, Littlechild D, Marshall S, McDermott L, Whitlow R, Browne D, Sunday J, Smith PA. (2021) Key information needs to move from knowledge to action for biodiversity conservation in Canada. Biological Conservation 256: 108983
53. Buxton RT, Bennett JR, Reid AJ, Shulman CM, Cooke SJ, Francis CM, Nyboer EA, Pritchard G, Binley A, Avery-Gomm S, Ban NC, Beazley KF, Bennett E, Blight LK, Bortolotti LE, Camfield AF, Gadallah Z, Jacob AL, Naujokaitis-Lewis I, Raudsepp-Hearne C, Roche DG, Soulard F, Stralberg D, Sadler KD, Solarik KA, Ziter CD, Brandt J, McKindsey CW, Greenwood DA, Boxall PC, Ngolah C, Chan KMA, Lapen D, Poser S, Girard J, DiBacco C, Hayne S, Orihel D, Lewis D, Littlechild D, Marshall S, McDermott L, Whitlow R, Browne D, Sunday J, Smith PA. (2021) Key information needs to move from knowledge to action for biodiversity conservation in Canada. Biological Conservation 256: 108983
52. Rytwinski T, Cooke SJ, Taylor JS, Roche DG, Smith PA, Mitchell GW, Smokorowski KE, Prior K, Bennett JR (2021) Acting in the face of evidentiary ambiguity, bias, and absence arising from systematic reviews in applied environmental science. Science of the Total Environment 775: 145122
51. Buxton R, Nyboer EA, Pigeon K, Raby GD, Rytwinsky T, Gallagher AJ, Schuster R, Lin HS, Fahrig L, Bennett JR, Cooke SJ, Roche DG (2021) Avoiding wasted research resources in conservation science. Conservation Science and Practice 3: e329
50. Norin T, Sundin J, Morgan R, Andreassen AH, Amcoff MJ, Speers-Roesch B, Jutfelt F, Binning SA, Roche DG, Clark TD (2021) Predator presence affects activity patterns but not food consumption or growth of juvenile corkwing wrasse (Symphodus melops). Behavioural Ecology and Sociobiology 75: article 14
2020
2020
49. Roche DG, Granados M, Austin CC, Wilson S, Mitchell GM, Smith PA, Cooke SJ, Bennett JR (2020) Open government data and environmental science: A Federal Canadian perspective. FACETS 5: 942-952
48. Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Reply to: Methods matter in repeating ocean acidification studies. Nature 586: E25–E27
47. Buxton R, Bergman JN, Lin H-Y, Binley AD, Avery-Gomm S, Schuster R, Roche DG, Bennett JR (2020) Three lessons conservation science can learn from the COVID-19 pandemic. Conservation Biology 34: 1331-1332
46. Roche DG, Amcoff M, Morgan R, Sundin J, Andreassen AH, Finnøen MH, Lawrence MJ, Henderson E, Norin T, Speers-Roesch B, Brown C, Clark TD, Bshary R, Leung B, Jutfelt F, Binning SA (2020) Replication alert: behavioural lateralisation in a detour test is not repeatable in fishes. Animal Behaviour 167: 55-64
46. Roche DG, Amcoff M, Morgan R, Sundin J, Andreassen AH, Finnøen MH, Lawrence MJ, Henderson E, Norin T, Speers-Roesch B, Brown C, Clark TD, Bshary R, Leung B, Jutfelt F, Binning SA (2020) Replication alert: behavioural lateralisation in a detour test is not repeatable in fishes. Animal Behaviour 167: 55-64
45. Lennox RJ, Harcourt R, Bennett JR, Davies A, Ford AT, Frey RM, Hayward MW, Hussey NE, Iverson SJ, Kays R, Kessel ST, McMahon C, Muelbert M, Murray TS, Nguyen VM, Pye JD, Roche DG, Whoriskey FG, Young N, Cooke SJ (2020) A novel framework to protect animal data in a world of eco-surveillance. BioScience 70: 468-476
45. Lennox RJ, Harcourt R, Bennett JR, Davies A, Ford AT, Frey RM, Hayward MW, Hussey NE, Iverson SJ, Kays R, Kessel ST, McMahon C, Muelbert M, Murray TS, Nguyen VM, Pye JD, Roche DG, Whoriskey FG, Young N, Cooke SJ (2020) A novel framework to protect animal data in a world of eco-surveillance. BioScience 70: 468-476
44. Raby GD, Chapman JM, de Bruijn R, Eliason EJ, Elvidge CK, Hasler CT, Madliger CL, Nyboer EA, Reid AJ, Roche DG, Rytwinski T, Ward TD, Wilson ADM, Cooke SJ (2020) Teaching post-secondary students in ecology and evolution: Strategies for early-career researchers. Ideas in Ecology and Evolution 13: 14–24
43. Demairé C, Triki Z, Binning SA, Glauser G, Roche DG, Bshary R (2020) Reduced access to cleaner fish negatively impacts the physiological state of two resident reef fishes. Marine Biology 167: 48
43. Demairé C, Triki Z, Binning SA, Glauser G, Roche DG, Bshary R (2020) Reduced access to cleaner fish negatively impacts the physiological state of two resident reef fishes. Marine Biology 167: 48
42. Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Ocean acidification does not impair the behaviour of coral reef fishes. Nature 577: 370–375
42. Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Ocean acidification does not impair the behaviour of coral reef fishes. Nature 577: 370–375
2019
41. Roche DG, Bennett JR, Provencher J, Rytwinski T, Haddaway NR, Cooke SJ (2019) Environmental sciences benefit from robust evidence irrespective of speed. Science of the Total Environment 696: 134000
40. Wismer S, Pinto AI, Triki Z, Grutter AS, Roche DG, Bshary R (2019) Cue-based decision rules used by cleaner fish in a biological market task. Animal Behaviour doi: 10.1016/j.anbehav.2019.09.013
40. Wismer S, Pinto AI, Triki Z, Grutter AS, Roche DG, Bshary R (2019) Cue-based decision rules used by cleaner fish in a biological market task. Animal Behaviour doi: 10.1016/j.anbehav.2019.09.013
39. Jutfelt F, Roche DG, Clark TD, Norin T, Binning SA, Speers-Roesch B, Amcoff M, Morgan R, Andreassen AH, Sundin J (2019) Brain cooling marginally increases acute thermal tolerance in Atlantic cod. Journal of Experimental Biology jeb.208249
39. Jutfelt F, Roche DG, Clark TD, Norin T, Binning SA, Speers-Roesch B, Amcoff M, Morgan R, Andreassen AH, Sundin J (2019) Brain cooling marginally increases acute thermal tolerance in Atlantic cod. Journal of Experimental Biology jeb.208249
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38. Rund SSC, Braak K, Cator L, Copas K, Emrich SJ, Giraldo-Calderon GI, Johansson MA, Heydari N, Hobern D, Kelly SA, Lawson D, Lord C, MacCallum RM, Roche DG, Ryan SJ, Schigel D, Vandegrift K, Watts M, Zaspel JM, Pawar S (2019) Minimum Information for Reusable Arthropod Abundance Data (MIReAAD). Nature Scientific Data 6: 40
38. Rund SSC, Braak K, Cator L, Copas K, Emrich SJ, Giraldo-Calderon GI, Johansson MA, Heydari N, Hobern D, Kelly SA, Lawson D, Lord C, MacCallum RM, Roche DG, Ryan SJ, Schigel D, Vandegrift K, Watts M, Zaspel JM, Pawar S (2019) Minimum Information for Reusable Arthropod Abundance Data (MIReAAD). Nature Scientific Data 6: 40
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37. Sridhar VH, Roche DG, Gingins S (2019) Tracktor: image-based automated tracking of animal movement and behaviour. Methods in Ecology and Evolution 10: 815–820
37. Sridhar VH, Roche DG, Gingins S (2019) Tracktor: image-based automated tracking of animal movement and behaviour. Methods in Ecology and Evolution 10: 815–820
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2018
36. Quattrini F, Bshary R, Roche DG (2018) Does the presence of an odd individual affect group choice? Behavioral Ecology 29: 855-861
35. Binning SA, Roche DG, Grutter A, Colosio S, Sun D, Miest J, Bshary R (2018) Cleaner wrasse indirectly affect the cognitive performance of a damselfish through ectoparasite removal. Proceedings of the Royal Society B 285: 20172447
34. Jutfelt F, Norin T, Ern R, Overgaard J, Wang T, McKenzie DJ, Lefevre S, Nilsson GE, Metcalfe NB, Hickey AJR, Brijs J, Speers Roesch B, Roche DG, Gamperl AK, Raby G, Morgan R, Esbaugh AJ, Gräns A, Axelsson M, Ekström A, Sandblom E, Binning SA, Hicks JW, Seebacher F, Jørgensen C, Clark TD (2018) Oxygen- and capacity-limited thermal tolerance: blurring ecology and physiology. Journal of Experimental Biology 2221: jeb.169615
33. Steinegger M†, Roche DG†, Bshary R (2018) Simple decision rules underlie collaborative hunting in yellow saddle goatfish. Proceedings of the Royal Society B 285: 20172488
2017
32. Roche DG (2017) Evaluating Science’s open-data policy. Science 357: 6352
31. Clark TD, Roche DG, Binning SA, Speers-Roesch B, Sundin J (2017) Maximum thermal limits of coral reef damselfishes are size-dependent and resilient to near-future ocean acidification. Journal of Experimental Biology 220: 3519-3526
30. Mendoza Franco EF, Binning SA, Roche DG (2017) New and previously described dactylogyrid species (Monogenoidea: Polyonchoinea) and a gastrocotylinean pre-adult (Heteronchoinea) from pomacentrid and caesionid (Perciformes) fishes from Lizard Island, Great Barrier Reef, Australia. Acta Parasitologica doi: 62: 688-698
29. Binning SA, Shaw AK, Roche DG (2017) Parasites and host performance: incorporating infection into our understanding of animal movement. Integrative and Comparative Biology 57: 267-280
28. Gingins S, Roche DG†, Bshary R† (2017) Mutualistic cleaner fish maintains high escape performance despite privileged relationship with predators. Proceedings of the Royal Society B 284: 20162469
28. Gingins S, Roche DG†, Bshary R† (2017) Mutualistic cleaner fish maintains high escape performance despite privileged relationship with predators. Proceedings of the Royal Society B 284: 20162469
2016
27. Roche DG, Careau V, Binning SA (2016) Demystifying animal “personality” (or not): why individual variation matters to experimental biologists. Journal of Experimental Biology 219: 3832-3843
25. Clark TD, Binning SA, Raby GD, Speers-Roesch B, Sundin J, Jutfelt F, Roche DG (2016) Scientific misconduct: the elephant in the lab. Trends in Ecology & Evolution 31: 899-900
24. Rupia EJ†, Binning SA†, Roche DG†, Lu W (2016) Fight-flight or freeze-hide? Personality and metabolic phenotype mediate physiological defence responses in flatfish. Journal of Animal Ecology 85: 927–937
23. Rummer JL, Binning SA, Roche DG, Johansen JL (2016) Method matters: Considering locomotory mode and respirometry technique when estimating metabolic rates of fishes. Conservation Physiology 4: cow008
2015
22. Wagner ELE†, Roche DG†, Binning SA†, Wismer S, Bshary R (2015) Temporal comparison and predictors of fish species abundance and richness on undisturbed coral reef patches. PeerJ 3: e1459.
21. Roche DG, Kruuk LEB, Lanfear R, Binning SA (2015) Public data archiving in ecology and evolution: how well are we doing. PLOS Biology 13: e1002295
20. Jornod M and Roche DG (2015) Inter- vs intra-individual variation and temporal repeatability of escape responses in the coral reef fish Amblyglyphidodon curacao. Biology Open 4: 1387-1394.
19. Binning SA, Ros AFH, Nusbaumer D and Roche DG (2015) Physiological plasticity to water flow habitat in the damselfish, Acanthochromis polyacanthus: linking phenotype to performance. PLoS One 10: e0121983.
18. Binning SA and Roche DG (2015) Water flow and fin shape polymorphism in coral reef fishes. Ecology 96: 828–839.
2014
17. Binning SA, Barnes JI, Davies JN, Backwell PRY, Keogh JS, Roche DG (2014) Ectoparasites modify escape behaviour, but not performance, in a coral reef fish. Animal Behaviour 93: 1-7.
16. Roche DG, Lanfear R, Binning SA, Haff TM, Schwanz LE, Cain KE, Kokko H, Jennions MD, Kruuk LEB (2014) Troubleshooting public data archiving: suggestions to increase participation. PLoS Biology 12: e1001779.
- Editors’ Pick
15. Roche DG, Taylor MK, Binning SA, Johansen JL, Domenici P, Steffensen JF (2014) Unsteady water flow affects swimming energetics in a labriform fish (Cymatogaster aggregata). Journal of Experimental Biology 217: 414-422.
14. Binning SA, Roche DG, Fulton CJ (2014) Localised intraspecific variation in the swimming phenotype of a coral reef fish across different wave exposures. Oecologia 174: 623-630.
2013
13. Roche DG, Jennions MD, Binning SA (2013) Data deposition: Fees could damage public data archives. Nature 502: 171.
12. Roche DG, Binning SA, Strong LE, Davies JN, Jennions MD (2013) Increased behavioural lateralization in parasitized coral reef fish. Behavioural Ecology and Sociobiology 67: 1339-1344.
11. Roche DG, Binning SA, Bosiger Y, Johansen JL, Rummer JL (2013) Finding the best estimates of metabolic rates in a coral reef fish. Journal of Experimental Biology 216: 2103-2110.
10. Binning SA, Roche DG, Layton C (2013) Ectoparasites increase swimming costs in a coral reef fish. Biology Letters 9: 20120927.
9. Roche DG, Strong LE, Binning SA (2013) Prevalence of the parasitic cymothoid isopod Anilocra nemipteri on its fish host at Lizard Island, Great Barrier Reef. Australian Journal of Zoology 60: 330–333.
≤ 2012
8. Ménard A, Turgeon K, Roche DG, Binning SA, Kramer DL (2012) Shelters and their use by fishes on fringing coral reefs. PLOS One 7: e38450.
8. Ménard A, Turgeon K, Roche DG, Binning SA, Kramer DL (2012) Shelters and their use by fishes on fringing coral reefs. PLOS One 7: e38450.
7. KamY, Schlöder C, Roche DG, Torchin ME (2011) The Iraqi crab, Elamenopsis kempi in the Panama Canal: distribution, abundance and interactions with the exotic North American crab, Rhithropanopeus harrisii. Aquatic Invasions 6: 439-445.
6. Roche DG, Leung B, Mendoza Franco EF, Torchin ME (2010) Higher parasite richness, abundance and impact in native versus introduced cichlid fishes. International Journal for Parasitology 40: 1525-1530.
5. Mendoza Franco EF, Violante-González J, Roche DG (2009) Interoceanic occurrence of species of Aristocleidus Mueller, 1936 (Monogenoidea: Dactylogyridae) parasitizing the gills of gerreid fishes in the Neotropics. Parasitology Research 105: 703-708.
4. Oestreicher JS, Benessaiah K, Ruiz-Jaen MC, Sloan S, Turner K, Pelletier J, Guay B, Clark KE, Roche DG, Meiners M, Potvin C (2009) Avoiding deforestation in Panamanian protected areas: an analysis of protection effectiveness and implications for reducing emissions from deforestation and forest degradation. Global Environmental Change 19: 279-291.
3. Roche DG, Torchin ME, Leung B, Binning SA (2009) Localized invasion of the North American Harris mud crab, Rhithropanopeus harrisii, in the Panama Canal: implications for eradication and spread. Biological Invasions 11: 983-993.
2. Mendoza Franco EF, Roche DG, Torchin ME (2008) New species of Diplectanum (Monogenoidea: Diplectanidae), and proposal of a new genus of the Dactylogyridae from the gills of gerreid fishes (Teleostei) from Mexico and Panama. Folia Parasitologica 55: 171-179.
1. Roche DG and Torchin ME (2007) Established population of the North American Harris mud crab, Rhithropanopeus harrisii (Gould 1841) (Crustacea: Brachyura: Xanthidae) in the Panama Canal. Aquatic Invasions 2: 155-161.
