Publications on open science/data and reproducibility in science
† denotes equal author contributions
OPEN SCIENCE AND OPEN DATA
Berberi I & Roche DG (accepted) No evidence that mandatory open data policies increase error correction. Nature Ecology & Evolution
Jenkins T, Persaud B, Cowger W, Szigeti K, Roche DG, Clary E, Slowinskis, Lei B, Abeynayaka A, Nyadjro ES, Maes T, Hampton LT, Bergmann M, Aherne J, Mason SA, Honek J, Rezanezhad F, Lusher A, Booth AM, Smith RDL, Van Cappellen P (2022) Current state of microplastic pollution research data: trends in availability and sources of open data. Frontiers in Environmental Science 10: 912107
Bledsoe EK, Burant JBB, Higino GT, Roche DG, Binning SA, Finlay K, Pither J, Pollock LS, Sunday JM, Srivastava DS (2022) Data rescue: saving environmental data from extinction. Proceedings of the Royal Society B 289: 20220938
Roche DG, Berberi I, Dhane F, Lauzon F, Soeharjono S, Dakin R, Binning SA (2022) Slow improvements to the archiving quality of open datasets in evolution and ecology. Proceedings of the Royal Society B 289: 20212780
Roche DG, O’Dea RE, Kerr KA, Rytwinski T, Schuster R, Nguyen VM, Young N, Bennett JR, Cooke SJ (2021) Closing the knowledge-action gap in conservation with open science. Conservation Biology doi:10.1111/cobi.13835
O'Dea RE, Parker TH, Chee YE, Culina A, Drobniak SM, Duncan DH, Fidler F, Gould E, Ihle M, Kelly KD, Lagisz M, Roche DG, Sánchez-Tójar A, Wilkinson DP, Wintle BC, Nakagawa S (2021) Towards open, reliable, and transparent ecology and evolutionary biology. BMC Biology 19: article 68
Buxton R, Nyboer EA, Pigeon K, Raby GD, Rytwinsky T, Gallagher AJ, Schuster R, Lin HS, Fahrig L, Bennett JR, Cooke SJ, Roche DG (2021) Avoiding wasted research resources in conservation science. Conservation Science and Practice csp2.329
Soeharjono S & Roche DG (2021) Reported individual costs and benefits of sharing open data among Canadian academic faculty in ecology and evolution. BioScience biab024
Roche DG, Granados M, Austin CC, Wilson S, Mitchell GM, Smith PA, Cooke SJ, Bennett JR (2021) Open government data and environmental science: A Federal Canadian perspective. FACETS 5: 942-952
Buxton R, Bergman JN, Lin H-Y, Binley AD, Avery-Gomm S, Schuster R, Roche DG, Bennett JR (2021) Three lessons conservation science can learn from the COVID-19 pandemic: A call to action from ECRs. Conservation Biology 34: 1331-1332
Buxton R, Bergman JN, Lin H-Y, Binley AD, Avery-Gomm S, Schuster R, Roche DG, Bennett JR (2021) Three lessons conservation science can learn from the COVID-19 pandemic: A call to action from ECRs. Conservation Biology 34: 1331-1332
Lennox RJ, Harcourt R, Bennett JR, Davies A, Ford AT, Frey RM, Hayward MW, Hussey NE, Iverson SJ, Kays R, Kessel ST, McMahon C, Muelbert M, Murray TS, Nguyen VM, Pye JD, Roche DG, Whoriskey FG, Young N, Cooke SJ (2020) A novel framework to protect animal data in a world of eco-surveillance. BioScience doi: 10.1093/biosci/biaa035
Lennox RJ, Harcourt R, Bennett JR, Davies A, Ford AT, Frey RM, Hayward MW, Hussey NE, Iverson SJ, Kays R, Kessel ST, McMahon C, Muelbert M, Murray TS, Nguyen VM, Pye JD, Roche DG, Whoriskey FG, Young N, Cooke SJ (2020) A novel framework to protect animal data in a world of eco-surveillance. BioScience doi: 10.1093/biosci/biaa035
Roche DG, Bennett JR, Provencher J, Rytwinski T, Haddaway NR, Cooke SJ (2019) Environmental sciences benefit from robust evidence irrespective of speed. Science of the Total Environment 696: 134000
Rund SSC, Braak K, Cator L, Copas K, Emrich SJ, Giraldo-Calderon GI, Johansson MA, Heydari N, Hobern D, Kelly SA, Lawson D, Lord C, MacCallum RM, Roche DG, Ryan SJ, Schigel D, Vandegrift K, Watts M, Zaspel JM, Pawar S (2018) Minimum Information for Reusable Arthropod Abundance Data (MIReAAD). Nature Scientific Data 6: 40
Rund SSC, Braak K, Cator L, Copas K, Emrich SJ, Giraldo-Calderon GI, Johansson MA, Heydari N, Hobern D, Kelly SA, Lawson D, Lord C, MacCallum RM, Roche DG, Ryan SJ, Schigel D, Vandegrift K, Watts M, Zaspel JM, Pawar S (2018) Minimum Information for Reusable Arthropod Abundance Data (MIReAAD). Nature Scientific Data 6: 40
Roche DG (2017) Evaluating Science’s open-data policy. Science 357: 6352
Roche DG, Kruuk LEB, Lanfear R, Binning SA (2015) Public data archiving in ecology and evolution: how well are we doing. PLoS Biology 13: e1002295
Roche DG, Lanfear R, Binning SA, Haff TM, Schwanz LE, Cain KE, Kokko H, Jennions MD, Kruuk LEB (2014) Troubleshooting public data archiving: suggestions to increase participation. PLoS Biology 12: e1001779.
Roche DG, Jennions MD, Binning SA (2013) Data deposition: Fees could damage public data archives. Nature 502: 171.
REPRODUCIBILITY AND RESEARCH INTEGRITY
Cooke SJ, Young N, Donaldson MR, Nyboer EA, Roche DG, Madliger CL, Lennox RJ, Chapman JM, Faulkes Z and Bennett JR. (2021) Ten strategies for avoiding and overcoming authorship conflicts in academic publishing. FACETS 6: 1753–1770
Cooke SJ, Nguyen VM, Young N, Reid AJ, Roche DG, Bennett N, Rytwinski T, Bennett JR (2021) Contemporary authorship guidelines fail to recognize diverse contributions in conservation science research. Ecological Solutions and Evidence 2: e12060
Rytwinski T, Cooke SJ, Taylor JS, Roche DG, Smith PA, Mitchell GW, Smokorowski KE, Prior K, Bennett JR (2021) Acting in the face of evidentiary ambiguity, bias, and absence arising from systematic reviews in applied environmental science. Science of the Total Environment 775: 145122
Roche DG, Amcoff M, Morgan R, Sundin J, Andreassen AH, Finnøen MH, Lawrence MJ, Henderson E, Norin T, Speers-Roesch B, Brown C, Clark TD, Bshary R, Leung B, Jutfelt F, Binning SA (2020) Replication alert: behavioural lateralisation in a detour test is not repeatable in fishes. Animal Behaviour 167: 55-64
Roche DG, Amcoff M, Morgan R, Sundin J, Andreassen AH, Finnøen MH, Lawrence MJ, Henderson E, Norin T, Speers-Roesch B, Brown C, Clark TD, Bshary R, Leung B, Jutfelt F, Binning SA (2020) Replication alert: behavioural lateralisation in a detour test is not repeatable in fishes. Animal Behaviour 167: 55-64
Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Reply to: Methods matter in repeating ocean acidification studies. Nature 586: E25–E27
Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Ocean acidification does not impair the behaviour of coral reef fishes. Nature 577: 370–375
Clark TD, Raby GD, Roche DG, Binning SA, Speers-Roesch B, Jutfelt F, Sundin J (2020) Ocean acidification does not impair the behaviour of coral reef fishes. Nature 577: 370–375
Raby GD, Chapman JM, de Bruijn R, Eliason EJ, Elvidge CK, Hasler CT, Madliger CL, Nyboer EA, Reid AJ, Roche DG, Rytwinski T, Ward TD, Wilson ADM, Cooke SJ (2020) Teaching post-secondary students in ecology and evolution: Strategies for early-career researchers. Ideas in Ecology and Evolution 13: 14–24
Sridhar VH, Roche DG, Gingins S (2019) Tracktor: image-based automated tracking of animal movement and behaviour. Methods in Ecology and Evolution 10: 815–820
Sridhar VH, Roche DG, Gingins S (2019) Tracktor: image-based automated tracking of animal movement and behaviour. Methods in Ecology and Evolution 10: 815–820
Jutfelt F, Norin T, Ern R, Overgaard J, Wang T, McKenzie DJ, Lefevre S, Nilsson GE, Metcalfe NB, Hickey AJR, Brijs J, Speers Roesch B, Roche DG, Gamperl AK, Raby G, Morgan R, Esbaugh AJ, Gräns A, Axelsson M, Ekström A, Sandblom E, Binning SA, Hicks JW, Seebacher F, Jørgensen C, Clark TD (2018) Oxygen- and capacity-limited thermal tolerance: blurring ecology and physiology. Journal of Experimental Biology 2221: jeb.169615
Clark TD, Binning SA, Raby GD, Speers-Roesch B, Sundin J, Jutfelt F, Roche DG (2016) Scientific misconduct: the elephant in the lab. Trends in Ecology & Evolution 31: 899-900
